Chapter 10 Differential abundance analysis: functional
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10.1 Wilcoxon
10.1.1 Community elements differences:
Elements Daneborg Ittoqqortoormii Function
1 B0103 4.803665e-01 0.5691376000 Nucleic acid biosynthesis_UDP/UTP
2 B0205 3.986630e-01 0.3628119000 Amino acid biosynthesis_Threonine
3 B0207 3.776322e-01 0.4098170000 Amino acid biosynthesis_Methionine
4 B0213 5.541612e-01 0.5034503000 Amino acid biosynthesis_Proline
5 B0219 2.331814e-03 0.0041099320 Amino acid biosynthesis_GABA
6 B0220 8.256612e-02 0.0708564200 Amino acid biosynthesis_Beta-alanine
7 B0221 1.846192e-01 0.2143759000 Amino acid biosynthesis_Ornithine
8 B0307 2.212079e-01 0.2715057000 Amino acid derivative biosynthesis_Spermidine
9 B0702 5.196989e-01 0.4704878000 Vitamin biosynthesis_Riboflavin (B2)
10 B0704 2.289657e-01 0.2619218000 Vitamin biosynthesis_Pantothenate (B5)
11 B0705 2.685152e-01 0.2187839000 Vitamin biosynthesis_Pyridoxal-P (B6)
12 B0708 2.866538e-01 0.3360235000 Vitamin biosynthesis_Cobalamin (B12)
13 B0710 4.007905e-02 0.0475397500 Vitamin biosynthesis_Phylloquinone (K1)
14 B0801 1.539881e-03 0.0021263090 Aromatic compound biosynthesis_Salicylate
15 B0802 3.886593e-01 0.4737292000 Aromatic compound biosynthesis_Gallate
16 B0805 1.164352e-01 0.1026751000 Aromatic compound biosynthesis_Indole-3-acetate
17 B0902 1.030715e-03 0.0001853436 Metallophore biosynthesis_Aerobactin
18 B1012 6.541175e-03 0.0040366720 Antibiotic biosynthesis_Fosfomycin
19 B1028 4.633777e-03 0.0084958210 Antibiotic biosynthesis_Pyocyanin
20 D0102 7.090557e-02 0.0612379700 Lipid degradation_Fatty acid
21 D0103 6.328203e-02 0.0514885300 Lipid degradation_Oleate
22 D0201 1.448753e-01 0.1295450000 Polysaccharide degradation_Cellulose
23 D0203 2.786198e-01 0.2977752000 Polysaccharide degradation_Starch
24 D0205 8.817280e-02 0.0988987600 Polysaccharide degradation_Pectin
25 D0206 2.637350e-01 0.3466158000 Polysaccharide degradation_Alpha galactan
26 D0207 3.824963e-01 0.4391534000 Polysaccharide degradation_Beta-galactan
27 D0211 4.875337e-02 0.0622591200 Polysaccharide degradation_Alpha-mannan
28 D0213 1.573168e-01 0.2121044000 Polysaccharide degradation_Mucin
29 D0302 7.282498e-02 0.1039446400 Sugar degradation_Sucrose
30 D0304 1.320346e-01 0.1580921000 Sugar degradation_D-Arabinose
31 D0305 3.526289e-01 0.3060427000 Sugar degradation_D-Mannose
32 D0306 7.155777e-02 0.0854695200 Sugar degradation_D-Xylose
33 D0307 1.504186e-01 0.1774106000 Sugar degradation_L-Fucose
34 D0309 3.691148e-01 0.4352184000 Sugar degradation_Galactose
35 D0310 2.138309e-01 0.2382948000 Sugar degradation_NeuAc
36 D0501 7.120569e-01 0.7568889000 Amino acid degradation_Serine
37 D0503 1.647386e-02 0.0225366200 Amino acid degradation_Cysteine
38 D0504 8.992973e-02 0.0667828400 Amino acid degradation_Methionine
39 D0509 3.249079e-01 0.3824282000 Amino acid degradation_Arginine
40 D0511 4.687518e-01 0.4222418000 Amino acid degradation_Glutamate
41 D0516 3.849915e-03 0.0034554200 Amino acid degradation_Beta-alanine
42 D0603 2.165105e-03 0.0023180440 Nitrogen compound degradation_Urate
43 D0604 4.308410e-01 0.5173848000 Nitrogen compound degradation_GlcNAc
44 D0608 1.869179e-04 0.0005024345 Nitrogen compound degradation_Betaine
45 D0609 1.259039e-01 0.1087170000 Nitrogen compound degradation_L-carnitine
46 D0613 3.450657e-01 0.3032557000 Nitrogen compound degradation_Taurine
47 D0701 6.462446e-04 0.0090044261 Alcohol degradation_2,3-Butanediol
48 D0704 6.122587e-01 0.5540933000 Alcohol degradation_Glycerol
49 D0705 2.590039e-01 0.2895818000 Alcohol degradation_Propylene glycol
50 D0708 1.296890e-01 0.1121187000 Alcohol degradation_Phytol
51 D0801 2.013642e-05 0.0005815505 Xenobiotic degradation_Toluene
52 D0802 2.013642e-05 0.0005815505 Xenobiotic degradation_Xylene
53 D0805 6.101943e-05 0.0017622740 Xenobiotic degradation_Benzoate
54 D0807 8.328293e-03 0.0134305770 Xenobiotic degradation_Catechol
55 D0817 7.141985e-03 0.0071624840 Xenobiotic degradation_Trans-cinnamate
56 D0902 2.005745e-02 0.0059254260 Antibiotic degradation_Carbapenem
57 D0903 4.717263e-03 0.0057007140 Antibiotic degradation_Cephalosporin
58 D0905 8.576596e-02 0.1601438000 Antibiotic degradation_Streptogramin
59 D0911 1.398233e-01 0.2053753000 Antibiotic degradation_Lincosamide
60 S0101 7.166048e-01 0.6934966000 Cellular structure_Peptidoglycan
61 S0104 1.371278e-01 0.1821940000 Cellular structure_Lipoteichoic acid
62 S0201 1.839605e-01 0.2757946000 Appendages_Flagellum
10.1.2 Community functions differences
Code_function Daneborg Ittoqqortoormii Function
1 B03 0.08046173 0.0915978 Amino acid derivative biosynthesis
2 D02 0.19474800 0.2156341 Polysaccharide degradation
3 D07 0.37611120 0.3482431 Alcohol degradation
4 D09 0.14213640 0.1582357 Antibiotic degradation
5 S02 0.07926413 0.1203754 Appendages
